Cluster: HRGMv2_4787_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4787_8 | HRGMv2_4787_8_22 | 19649 | 20755 | - | GT28 |
| pfam | HRGMv2_4787_8 | HRGMv2_4787_8_23 | 20762 | 22126 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4787_8 | HRGMv2_4787_8_24 | 22254 | 23231 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_4787_8_22
Type: CAZyme
Location: 19649 - 20755 (-)
Type: CAZyme
Location: 19649 - 20755 (-)
Gene ID: HRGMv2_4787_8_23
Type: pfam
Location: 20762 - 22126 (-)
Type: pfam
Location: 20762 - 22126 (-)
Gene ID: HRGMv2_4787_8_24
Type: TC
Location: 22254 - 23231 (-)
Type: TC
Location: 22254 - 23231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella montpellierensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.