Cluster: HRGMv2_4787_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4787_3 | HRGMv2_4787_3_2 | 1646 | 3535 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_4787_3 | HRGMv2_4787_3_3 | 3605 | 3931 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4787_3 | HRGMv2_4787_3_4 | 4059 | 5219 | - | GT28 |
| pfam | HRGMv2_4787_3 | HRGMv2_4787_3_5 | 5417 | 5713 | - | Bac_DNA_binding | HU-HIG |
| pfam | HRGMv2_4787_3 | HRGMv2_4787_3_6 | 5742 | 6572 | - | MazG | MazG |
| TC | HRGMv2_4787_3 | HRGMv2_4787_3_7 | 6817 | 8397 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_4787_3_2
Type: TC
Location: 1646 - 3535 (-)
Type: TC
Location: 1646 - 3535 (-)
Gene ID: HRGMv2_4787_3_3
Type:
Location: 3605 - 3931 (+)
Type:
Location: 3605 - 3931 (+)
Gene ID: HRGMv2_4787_3_4
Type: CAZyme
Location: 4059 - 5219 (-)
Type: CAZyme
Location: 4059 - 5219 (-)
Gene ID: HRGMv2_4787_3_5
Type: pfam
Location: 5417 - 5713 (-)
Type: pfam
Location: 5417 - 5713 (-)
Gene ID: HRGMv2_4787_3_6
Type: pfam
Location: 5742 - 6572 (-)
Type: pfam
Location: 5742 - 6572 (-)
Gene ID: HRGMv2_4787_3_7
Type: TC
Location: 6817 - 8397 (-)
Type: TC
Location: 6817 - 8397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella montpellierensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.