Cluster: HRGMv2_4787_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4787
- CGC Family ID: CGCFAM_00100
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4787_2 | HRGMv2_4787_2_106 | 131764 | 132522 | - | GT2 |
| CAZyme | HRGMv2_4787_2 | HRGMv2_4787_2_107 | 133052 | 133822 | - | GT25 |
| CAZyme | HRGMv2_4787_2 | HRGMv2_4787_2_108 | 134342 | 135124 | - | GT25 |
| pfam | HRGMv2_4787_2 | HRGMv2_4787_2_109 | 135349 | 135747 | - | ATP-synt_DE | ATP-synt_DE_N |
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_110 | 135769 | 137190 | - | 3.A.2.1.5 |
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_111 | 137212 | 138069 | - | 3.A.2.1.5 |
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_112 | 138073 | 139608 | - | 3.A.2.1.5 |
Gene ID: HRGMv2_4787_2_106
Type: CAZyme
Location: 131764 - 132522 (-)
Type: CAZyme
Location: 131764 - 132522 (-)
Gene ID: HRGMv2_4787_2_107
Type: CAZyme
Location: 133052 - 133822 (-)
Type: CAZyme
Location: 133052 - 133822 (-)
Gene ID: HRGMv2_4787_2_108
Type: CAZyme
Location: 134342 - 135124 (-)
Type: CAZyme
Location: 134342 - 135124 (-)
Gene ID: HRGMv2_4787_2_109
Type: pfam
Location: 135349 - 135747 (-)
Type: pfam
Location: 135349 - 135747 (-)
Gene ID: HRGMv2_4787_2_110
Type: TC
Location: 135769 - 137190 (-)
Type: TC
Location: 135769 - 137190 (-)
Gene ID: HRGMv2_4787_2_111
Type: TC
Location: 137212 - 138069 (-)
Type: TC
Location: 137212 - 138069 (-)
Gene ID: HRGMv2_4787_2_112
Type: TC
Location: 138073 - 139608 (-)
Type: TC
Location: 138073 - 139608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella montpellierensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.