Cluster: HRGMv2_4787_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_38 | 53170 | 54888 | + | 3.D.10.1.4 |
| pfam | HRGMv2_4787_2 | HRGMv2_4787_2_39 | 54890 | 55858 | + | Fer2_3 | Fer4_8 | Fer4_17 |
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_40 | 55858 | 56730 | + | 3.D.10.1.4 |
| TC | HRGMv2_4787_2 | HRGMv2_4787_2_41 | 57430 | 58770 | - | 2.A.3.2.1 |
| pfam | HRGMv2_4787_2 | HRGMv2_4787_2_42 | 59436 | 60863 | - | Lyase_1 | ASL_C2 |
| pfam | HRGMv2_4787_2 | HRGMv2_4787_2_43 | 61012 | 62223 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | HRGMv2_4787_2 | HRGMv2_4787_2_44 | 63417 | 64478 | - | GT51 |
Gene ID: HRGMv2_4787_2_38
Type: TC
Location: 53170 - 54888 (+)
Type: TC
Location: 53170 - 54888 (+)
Gene ID: HRGMv2_4787_2_39
Type: pfam
Location: 54890 - 55858 (+)
Type: pfam
Location: 54890 - 55858 (+)
Gene ID: HRGMv2_4787_2_40
Type: TC
Location: 55858 - 56730 (+)
Type: TC
Location: 55858 - 56730 (+)
Gene ID: HRGMv2_4787_2_41
Type: TC
Location: 57430 - 58770 (-)
Type: TC
Location: 57430 - 58770 (-)
Gene ID: HRGMv2_4787_2_42
Type: pfam
Location: 59436 - 60863 (-)
Type: pfam
Location: 59436 - 60863 (-)
Gene ID: HRGMv2_4787_2_43
Type: pfam
Location: 61012 - 62223 (-)
Type: pfam
Location: 61012 - 62223 (-)
Gene ID: HRGMv2_4787_2_44
Type: CAZyme
Location: 63417 - 64478 (-)
Type: CAZyme
Location: 63417 - 64478 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella montpellierensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.