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Cluster: HRGMv2_4787_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4787_1 HRGMv2_4787_1_280 334501 335238 - 3.A.7.13.2
CAZyme HRGMv2_4787_1 HRGMv2_4787_1_281 335253 336206 - GT2
CAZyme HRGMv2_4787_1 HRGMv2_4787_1_282 336627 338033 + GT83
pfam HRGMv2_4787_1 HRGMv2_4787_1_283 338455 338832 - HupH_C
TC HRGMv2_4787_1 HRGMv2_4787_1_284 338825 339322 - 3.D.7.2.3
pfam HRGMv2_4787_1 HRGMv2_4787_1_285 339306 340031 - Ni_hydr_CYTB
TC HRGMv2_4787_1 HRGMv2_4787_1_286 340046 341947 - 3.D.7.2.3
TC HRGMv2_4787_1 HRGMv2_4787_1_287 341947 343098 - 3.D.7.2.3
Gene ID: HRGMv2_4787_1_280
Type: TC
Location: 334501 - 335238 (-)
Gene ID: HRGMv2_4787_1_281
Type: CAZyme
Location: 335253 - 336206 (-)
Gene ID: HRGMv2_4787_1_282
Type: CAZyme
Location: 336627 - 338033 (+)
Gene ID: HRGMv2_4787_1_283
Type: pfam
Location: 338455 - 338832 (-)
Gene ID: HRGMv2_4787_1_284
Type: TC
Location: 338825 - 339322 (-)
Gene ID: HRGMv2_4787_1_285
Type: pfam
Location: 339306 - 340031 (-)
Gene ID: HRGMv2_4787_1_286
Type: TC
Location: 340046 - 341947 (-)
Gene ID: HRGMv2_4787_1_287
Type: TC
Location: 341947 - 343098 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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