Cluster: HRGMv2_4787_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4787_8 | HRGMv2_4787_8_57 | 56806 | 58362 | + | 2.A.66.2.14 |
| NULL(UNKNOWN) | HRGMv2_4787_8 | HRGMv2_4787_8_58 | 58487 | 58897 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4787_8 | HRGMv2_4787_8_59 | 58970 | 60730 | - | N6_Mtase |
| TC | HRGMv2_4787_8 | HRGMv2_4787_8_60 | 60906 | 61685 | - | 3.A.1.3.2 |
| peptidase | HRGMv2_4787_8 | HRGMv2_4787_8_61 | 61842 | 63044 | + | M20.UND |
| CAZyme | HRGMv2_4787_8 | HRGMv2_4787_8_62 | 63315 | 65000 | - | GH2 |
Gene ID: HRGMv2_4787_8_57
Type: TC
Location: 56806 - 58362 (+)
Type: TC
Location: 56806 - 58362 (+)
Gene ID: HRGMv2_4787_8_58
Type:
Location: 58487 - 58897 (-)
Type:
Location: 58487 - 58897 (-)
Gene ID: HRGMv2_4787_8_59
Type: pfam
Location: 58970 - 60730 (-)
Type: pfam
Location: 58970 - 60730 (-)
Gene ID: HRGMv2_4787_8_60
Type: TC
Location: 60906 - 61685 (-)
Type: TC
Location: 60906 - 61685 (-)
Gene ID: HRGMv2_4787_8_61
Type: peptidase
Location: 61842 - 63044 (+)
Type: peptidase
Location: 61842 - 63044 (+)
Gene ID: HRGMv2_4787_8_62
Type: CAZyme
Location: 63315 - 65000 (-)
Type: CAZyme
Location: 63315 - 65000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella montpellierensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.