Cluster: HRGMv2_4786_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4786
- CGC Family ID: CGCFAM_10426
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4786_22 | HRGMv2_4786_22_7 | 6454 | 7107 | - | 3.A.1.24.5 |
| TC | HRGMv2_4786_22 | HRGMv2_4786_22_8 | 7088 | 8131 | - | 3.A.1.24.1 |
| pfam | HRGMv2_4786_22 | HRGMv2_4786_22_9 | 8639 | 10789 | + | Gly_radical | ATP-cone | NRDD |
| pfam | HRGMv2_4786_22 | HRGMv2_4786_22_10 | 10789 | 11310 | + | Fer4_12 |
| CAZyme | HRGMv2_4786_22 | HRGMv2_4786_22_11 | 11600 | 13654 | - | GT51 |
Gene ID: HRGMv2_4786_22_7
Type: TC
Location: 6454 - 7107 (-)
Type: TC
Location: 6454 - 7107 (-)
Gene ID: HRGMv2_4786_22_8
Type: TC
Location: 7088 - 8131 (-)
Type: TC
Location: 7088 - 8131 (-)
Gene ID: HRGMv2_4786_22_9
Type: pfam
Location: 8639 - 10789 (+)
Type: pfam
Location: 8639 - 10789 (+)
Gene ID: HRGMv2_4786_22_10
Type: pfam
Location: 10789 - 11310 (+)
Type: pfam
Location: 10789 - 11310 (+)
Gene ID: HRGMv2_4786_22_11
Type: CAZyme
Location: 11600 - 13654 (-)
Type: CAZyme
Location: 11600 - 13654 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
CAMCNU01
Species
CAMCNU01 sp902488965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.