Cluster: HRGMv2_4786_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4786
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4786_5 | HRGMv2_4786_5_10 | 7457 | 8560 | - | GT28 |
| pfam | HRGMv2_4786_5 | HRGMv2_4786_5_11 | 8557 | 9924 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4786_5 | HRGMv2_4786_5_12 | 9990 | 10943 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4786_5_10
Type: CAZyme
Location: 7457 - 8560 (-)
Type: CAZyme
Location: 7457 - 8560 (-)
Gene ID: HRGMv2_4786_5_11
Type: pfam
Location: 8557 - 9924 (-)
Type: pfam
Location: 8557 - 9924 (-)
Gene ID: HRGMv2_4786_5_12
Type: TC
Location: 9990 - 10943 (-)
Type: TC
Location: 9990 - 10943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
CAMCNU01
Species
CAMCNU01 sp902488965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.