Cluster: HRGMv2_4786_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4786
- CGC Family ID: CGCFAM_05743
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4786_4 | HRGMv2_4786_4_9 | 13136 | 13924 | - | GT25 |
| CAZyme | HRGMv2_4786_4 | HRGMv2_4786_4_10 | 14082 | 15035 | + | GT9 |
| CAZyme | HRGMv2_4786_4 | HRGMv2_4786_4_11 | 15157 | 15945 | - | GT25 |
| CAZyme | HRGMv2_4786_4 | HRGMv2_4786_4_12 | 16111 | 17283 | - | GT9 |
| TC | HRGMv2_4786_4 | HRGMv2_4786_4_13 | 17378 | 18673 | - | 3.A.18.1.1 |
Gene ID: HRGMv2_4786_4_9
Type: CAZyme
Location: 13136 - 13924 (-)
Type: CAZyme
Location: 13136 - 13924 (-)
Gene ID: HRGMv2_4786_4_10
Type: CAZyme
Location: 14082 - 15035 (+)
Type: CAZyme
Location: 14082 - 15035 (+)
Gene ID: HRGMv2_4786_4_11
Type: CAZyme
Location: 15157 - 15945 (-)
Type: CAZyme
Location: 15157 - 15945 (-)
Gene ID: HRGMv2_4786_4_12
Type: CAZyme
Location: 16111 - 17283 (-)
Type: CAZyme
Location: 16111 - 17283 (-)
Gene ID: HRGMv2_4786_4_13
Type: TC
Location: 17378 - 18673 (-)
Type: TC
Location: 17378 - 18673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
CAMCNU01
Species
CAMCNU01 sp902488965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.