Cluster: HRGMv2_4784_CGC9
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_4784
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4784_7 | HRGMv2_4784_7_22 | 24928 | 27057 | - | 9.A.8.1.5 |
| STP | HRGMv2_4784_7 | HRGMv2_4784_7_23 | 27083 | 27304 | - | FeoA |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_24 | 27582 | 29606 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_4784_7 | HRGMv2_4784_7_25 | 29622 | 30812 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4784_7 | HRGMv2_4784_7_26 | 30831 | 31952 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_27 | 32025 | 33449 | + | GT5 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_28 | 33465 | 35879 | + | GT35 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_29 | 35947 | 37788 | + | GH13_39 |
| STP | HRGMv2_4784_7 | HRGMv2_4784_7_30 | 37857 | 38918 | + | Peptidase_M23 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_31 | 38921 | 39793 | + | CE4 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_32 | 39859 | 42954 | + | GH2 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_33 | 43120 | 44841 | - | PL37 |
| TC | HRGMv2_4784_7 | HRGMv2_4784_7_34 | 44838 | 45467 | - | 2.A.87.2.3 |
| CAZyme | HRGMv2_4784_7 | HRGMv2_4784_7_35 | 45588 | 48353 | - | CBM85 | GH10 |
Gene ID: HRGMv2_4784_7_22
Type: TC
Location: 24928 - 27057 (-)
Type: TC
Location: 24928 - 27057 (-)
Gene ID: HRGMv2_4784_7_23
Type: STP
Location: 27083 - 27304 (-)
Type: STP
Location: 27083 - 27304 (-)
Gene ID: HRGMv2_4784_7_24
Type: CAZyme
Location: 27582 - 29606 (+)
Type: CAZyme
Location: 27582 - 29606 (+)
Gene ID: HRGMv2_4784_7_25
Type: pfam
Location: 29622 - 30812 (+)
Type: pfam
Location: 29622 - 30812 (+)
Gene ID: HRGMv2_4784_7_26
Type: pfam
Location: 30831 - 31952 (+)
Type: pfam
Location: 30831 - 31952 (+)
Gene ID: HRGMv2_4784_7_27
Type: CAZyme
Location: 32025 - 33449 (+)
Type: CAZyme
Location: 32025 - 33449 (+)
Gene ID: HRGMv2_4784_7_28
Type: CAZyme
Location: 33465 - 35879 (+)
Type: CAZyme
Location: 33465 - 35879 (+)
Gene ID: HRGMv2_4784_7_29
Type: CAZyme
Location: 35947 - 37788 (+)
Type: CAZyme
Location: 35947 - 37788 (+)
Gene ID: HRGMv2_4784_7_30
Type: STP
Location: 37857 - 38918 (+)
Type: STP
Location: 37857 - 38918 (+)
Gene ID: HRGMv2_4784_7_31
Type: CAZyme
Location: 38921 - 39793 (+)
Type: CAZyme
Location: 38921 - 39793 (+)
Gene ID: HRGMv2_4784_7_32
Type: CAZyme
Location: 39859 - 42954 (+)
Type: CAZyme
Location: 39859 - 42954 (+)
Gene ID: HRGMv2_4784_7_33
Type: CAZyme
Location: 43120 - 44841 (-)
Type: CAZyme
Location: 43120 - 44841 (-)
Gene ID: HRGMv2_4784_7_34
Type: TC
Location: 44838 - 45467 (-)
Type: TC
Location: 44838 - 45467 (-)
Gene ID: HRGMv2_4784_7_35
Type: CAZyme
Location: 45588 - 48353 (-)
Type: CAZyme
Location: 45588 - 48353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.