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Cluster: HRGMv2_4784_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4784_2 HRGMv2_4784_2_62 64316 67417 - GH106
TF HRGMv2_4784_2 HRGMv2_4784_2_63 67533 68390 - HTH_AraC | HTH_AraC
TF HRGMv2_4784_2 HRGMv2_4784_2_64 68454 69356 - HTH_1
TC HRGMv2_4784_2 HRGMv2_4784_2_65 69516 70769 + 2.A.37.3.3
STP HRGMv2_4784_2 HRGMv2_4784_2_66 70820 72430 - HhH-GPD | NUDIX
CAZyme HRGMv2_4784_2 HRGMv2_4784_2_67 72451 74382 - GH127
CAZyme HRGMv2_4784_2 HRGMv2_4784_2_68 74666 76363 + GH2
CAZyme HRGMv2_4784_2 HRGMv2_4784_2_69 76500 79250 + CBM85 | GH10
pfam HRGMv2_4784_2 HRGMv2_4784_2_70 79397 82183 + UPF0182
TC HRGMv2_4784_2 HRGMv2_4784_2_71 82218 83153 - 3.A.5.1.1
Gene ID: HRGMv2_4784_2_62
Type: CAZyme
Location: 64316 - 67417 (-)
Gene ID: HRGMv2_4784_2_63
Type: TF
Location: 67533 - 68390 (-)
Gene ID: HRGMv2_4784_2_64
Type: TF
Location: 68454 - 69356 (-)
Gene ID: HRGMv2_4784_2_65
Type: TC
Location: 69516 - 70769 (+)
Gene ID: HRGMv2_4784_2_66
Type: STP
Location: 70820 - 72430 (-)
Gene ID: HRGMv2_4784_2_67
Type: CAZyme
Location: 72451 - 74382 (-)
Gene ID: HRGMv2_4784_2_68
Type: CAZyme
Location: 74666 - 76363 (+)
Gene ID: HRGMv2_4784_2_69
Type: CAZyme
Location: 76500 - 79250 (+)
Gene ID: HRGMv2_4784_2_70
Type: pfam
Location: 79397 - 82183 (+)
Gene ID: HRGMv2_4784_2_71
Type: TC
Location: 82218 - 83153 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
JAJXRJ01
→
Species
JAJXRJ01 sp021629085

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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