Cluster: HRGMv2_4784_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4784
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_1 | HRGMv2_4784_1_104 | 109197 | 111500 | - | CBM85 | GH10 |
| CAZyme | HRGMv2_4784_1 | HRGMv2_4784_1_105 | 111616 | 112461 | - | CE4 |
| pfam | HRGMv2_4784_1 | HRGMv2_4784_1_106 | 112743 | 115361 | + | SLH |
| CAZyme | HRGMv2_4784_1 | HRGMv2_4784_1_107 | 115499 | 116467 | + | CE7 |
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_108 | 116526 | 117356 | + | 3.A.1.3.15 |
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_109 | 117434 | 118156 | + | 3.A.1.3.15 |
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_110 | 118143 | 118865 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_4784_1_104
Type: CAZyme
Location: 109197 - 111500 (-)
Type: CAZyme
Location: 109197 - 111500 (-)
Gene ID: HRGMv2_4784_1_105
Type: CAZyme
Location: 111616 - 112461 (-)
Type: CAZyme
Location: 111616 - 112461 (-)
Gene ID: HRGMv2_4784_1_106
Type: pfam
Location: 112743 - 115361 (+)
Type: pfam
Location: 112743 - 115361 (+)
Gene ID: HRGMv2_4784_1_107
Type: CAZyme
Location: 115499 - 116467 (+)
Type: CAZyme
Location: 115499 - 116467 (+)
Gene ID: HRGMv2_4784_1_108
Type: TC
Location: 116526 - 117356 (+)
Type: TC
Location: 116526 - 117356 (+)
Gene ID: HRGMv2_4784_1_109
Type: TC
Location: 117434 - 118156 (+)
Type: TC
Location: 117434 - 118156 (+)
Gene ID: HRGMv2_4784_1_110
Type: TC
Location: 118143 - 118865 (+)
Type: TC
Location: 118143 - 118865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.