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Cluster: HRGMv2_4784_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4784_1 HRGMv2_4784_1_54 60354 61466 - 9.B.160.1.10
CAZyme HRGMv2_4784_1 HRGMv2_4784_1_55 61694 63601 + GH5_19
pfam HRGMv2_4784_1 HRGMv2_4784_1_56 63598 64623 + PMI_typeI_cat | MPI_cupin_dom
TC HRGMv2_4784_1 HRGMv2_4784_1_57 64831 65373 + 2.A.51.1.6
TC HRGMv2_4784_1 HRGMv2_4784_1_58 65370 65924 + 2.A.51.1.6
TC HRGMv2_4784_1 HRGMv2_4784_1_59 66073 67992 + 9.B.18.2.1
TC HRGMv2_4784_1 HRGMv2_4784_1_60 68060 69463 + 2.A.66.1.45
Gene ID: HRGMv2_4784_1_54
Type: TC
Location: 60354 - 61466 (-)
Gene ID: HRGMv2_4784_1_55
Type: CAZyme
Location: 61694 - 63601 (+)
Gene ID: HRGMv2_4784_1_56
Type: pfam
Location: 63598 - 64623 (+)
Gene ID: HRGMv2_4784_1_57
Type: TC
Location: 64831 - 65373 (+)
Gene ID: HRGMv2_4784_1_58
Type: TC
Location: 65370 - 65924 (+)
Gene ID: HRGMv2_4784_1_59
Type: TC
Location: 66073 - 67992 (+)
Gene ID: HRGMv2_4784_1_60
Type: TC
Location: 68060 - 69463 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
JAJXRJ01
→
Species
JAJXRJ01 sp021629085

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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