Cluster: HRGMv2_4784_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_10002
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4784_45 | HRGMv2_4784_45_11 | 9043 | 9720 | - | 3.A.1.125.3 |
| TC | HRGMv2_4784_45 | HRGMv2_4784_45_12 | 9814 | 10728 | - | 2.A.21.9.2 |
| TF | HRGMv2_4784_45 | HRGMv2_4784_45_13 | 10731 | 11375 | - | Trans_reg_C |
| NULL(UNKNOWN) | HRGMv2_4784_45 | HRGMv2_4784_45_14 | 11529 | 12134 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4784_45 | HRGMv2_4784_45_15 | 12684 | 18218 | - | CBM32 | CE6 |
Gene ID: HRGMv2_4784_45_11
Type: TC
Location: 9043 - 9720 (-)
Type: TC
Location: 9043 - 9720 (-)
Gene ID: HRGMv2_4784_45_12
Type: TC
Location: 9814 - 10728 (-)
Type: TC
Location: 9814 - 10728 (-)
Gene ID: HRGMv2_4784_45_13
Type: TF
Location: 10731 - 11375 (-)
Type: TF
Location: 10731 - 11375 (-)
Gene ID: HRGMv2_4784_45_14
Type:
Location: 11529 - 12134 (-)
Type:
Location: 11529 - 12134 (-)
Gene ID: HRGMv2_4784_45_15
Type: CAZyme
Location: 12684 - 18218 (-)
Type: CAZyme
Location: 12684 - 18218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.