Cluster: HRGMv2_4784_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4784
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_40 | HRGMv2_4784_40_4 | 3278 | 4438 | - | GH179 |
| CAZyme | HRGMv2_4784_40 | HRGMv2_4784_40_5 | 4603 | 7404 | - | CBM85 | GH10 |
| pfam | HRGMv2_4784_40 | HRGMv2_4784_40_6 | 7564 | 8607 | - | IF-2B |
| pfam | HRGMv2_4784_40 | HRGMv2_4784_40_7 | 8613 | 9839 | - | GlcNAc_2-epim |
| TC | HRGMv2_4784_40 | HRGMv2_4784_40_8 | 10020 | 10592 | - | 3.A.1.25.3 |
Gene ID: HRGMv2_4784_40_4
Type: CAZyme
Location: 3278 - 4438 (-)
Type: CAZyme
Location: 3278 - 4438 (-)
Gene ID: HRGMv2_4784_40_5
Type: CAZyme
Location: 4603 - 7404 (-)
Type: CAZyme
Location: 4603 - 7404 (-)
Gene ID: HRGMv2_4784_40_6
Type: pfam
Location: 7564 - 8607 (-)
Type: pfam
Location: 7564 - 8607 (-)
Gene ID: HRGMv2_4784_40_7
Type: pfam
Location: 8613 - 9839 (-)
Type: pfam
Location: 8613 - 9839 (-)
Gene ID: HRGMv2_4784_40_8
Type: TC
Location: 10020 - 10592 (-)
Type: TC
Location: 10020 - 10592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.