Cluster: HRGMv2_4784_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_06115
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_33 | HRGMv2_4784_33_5 | 4201 | 7011 | + | CBM85 | GH10 |
| TF | HRGMv2_4784_33 | HRGMv2_4784_33_6 | 7218 | 7667 | + | MarR |
| TC | HRGMv2_4784_33 | HRGMv2_4784_33_7 | 7664 | 9379 | + | 3.A.1.135.7 |
| TC | HRGMv2_4784_33 | HRGMv2_4784_33_8 | 9372 | 11165 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4784_33_5
Type: CAZyme
Location: 4201 - 7011 (+)
Type: CAZyme
Location: 4201 - 7011 (+)
Gene ID: HRGMv2_4784_33_6
Type: TF
Location: 7218 - 7667 (+)
Type: TF
Location: 7218 - 7667 (+)
Gene ID: HRGMv2_4784_33_7
Type: TC
Location: 7664 - 9379 (+)
Type: TC
Location: 7664 - 9379 (+)
Gene ID: HRGMv2_4784_33_8
Type: TC
Location: 9372 - 11165 (+)
Type: TC
Location: 9372 - 11165 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.