Cluster: HRGMv2_4784_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_10684
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4784_24 | HRGMv2_4784_24_1 | 395 | 1531 | + | 9.B.34.1.2 |
| TF | HRGMv2_4784_24 | HRGMv2_4784_24_2 | 1549 | 2532 | + | LacI |
| CAZyme | HRGMv2_4784_24 | HRGMv2_4784_24_3 | 2636 | 3676 | + | GH113 |
| CAZyme | HRGMv2_4784_24 | HRGMv2_4784_24_4 | 3937 | 5250 | - | GH4 |
Gene ID: HRGMv2_4784_24_1
Type: TC
Location: 395 - 1531 (+)
Type: TC
Location: 395 - 1531 (+)
Gene ID: HRGMv2_4784_24_2
Type: TF
Location: 1549 - 2532 (+)
Type: TF
Location: 1549 - 2532 (+)
Gene ID: HRGMv2_4784_24_3
Type: CAZyme
Location: 2636 - 3676 (+)
Type: CAZyme
Location: 2636 - 3676 (+)
Gene ID: HRGMv2_4784_24_4
Type: CAZyme
Location: 3937 - 5250 (-)
Type: CAZyme
Location: 3937 - 5250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.