Cluster: HRGMv2_4784_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4784
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_19 | HRGMv2_4784_19_14 | 15863 | 16708 | - | GH16_3 |
| TF | HRGMv2_4784_19 | HRGMv2_4784_19_15 | 16843 | 17643 | + | HTH_AraC | HTH_AraC |
| STP | HRGMv2_4784_19 | HRGMv2_4784_19_16 | 17711 | 18244 | + | SKI |
| TC | HRGMv2_4784_19 | HRGMv2_4784_19_17 | 18367 | 19764 | - | 2.A.66.1.28 |
| CAZyme | HRGMv2_4784_19 | HRGMv2_4784_19_18 | 19913 | 20935 | - | CE19 |
| CAZyme | HRGMv2_4784_19 | HRGMv2_4784_19_19 | 21079 | 22395 | - | GH4 |
Gene ID: HRGMv2_4784_19_14
Type: CAZyme
Location: 15863 - 16708 (-)
Type: CAZyme
Location: 15863 - 16708 (-)
Gene ID: HRGMv2_4784_19_15
Type: TF
Location: 16843 - 17643 (+)
Type: TF
Location: 16843 - 17643 (+)
Gene ID: HRGMv2_4784_19_16
Type: STP
Location: 17711 - 18244 (+)
Type: STP
Location: 17711 - 18244 (+)
Gene ID: HRGMv2_4784_19_17
Type: TC
Location: 18367 - 19764 (-)
Type: TC
Location: 18367 - 19764 (-)
Gene ID: HRGMv2_4784_19_18
Type: CAZyme
Location: 19913 - 20935 (-)
Type: CAZyme
Location: 19913 - 20935 (-)
Gene ID: HRGMv2_4784_19_19
Type: CAZyme
Location: 21079 - 22395 (-)
Type: CAZyme
Location: 21079 - 22395 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.