Cluster: HRGMv2_4784_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_00132
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_17 | HRGMv2_4784_17_13 | 19888 | 21093 | + | GT4 |
| CAZyme | HRGMv2_4784_17 | HRGMv2_4784_17_14 | 21171 | 22241 | + | GT4 |
| pfam | HRGMv2_4784_17 | HRGMv2_4784_17_15 | 22264 | 23538 | + | Wzy_C |
| CAZyme | HRGMv2_4784_17 | HRGMv2_4784_17_16 | 23507 | 24586 | + | GT4 |
| pfam | HRGMv2_4784_17 | HRGMv2_4784_17_17 | 24609 | 26147 | + | Polysacc_synt | Polysacc_synt_3 |
| TC | HRGMv2_4784_17 | HRGMv2_4784_17_18 | 26161 | 27189 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_4784_17_13
Type: CAZyme
Location: 19888 - 21093 (+)
Type: CAZyme
Location: 19888 - 21093 (+)
Gene ID: HRGMv2_4784_17_14
Type: CAZyme
Location: 21171 - 22241 (+)
Type: CAZyme
Location: 21171 - 22241 (+)
Gene ID: HRGMv2_4784_17_15
Type: pfam
Location: 22264 - 23538 (+)
Type: pfam
Location: 22264 - 23538 (+)
Gene ID: HRGMv2_4784_17_16
Type: CAZyme
Location: 23507 - 24586 (+)
Type: CAZyme
Location: 23507 - 24586 (+)
Gene ID: HRGMv2_4784_17_17
Type: pfam
Location: 24609 - 26147 (+)
Type: pfam
Location: 24609 - 26147 (+)
Gene ID: HRGMv2_4784_17_18
Type: TC
Location: 26161 - 27189 (+)
Type: TC
Location: 26161 - 27189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.