Cluster: HRGMv2_4784_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_01146
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_11 | HRGMv2_4784_11_12 | 14164 | 17220 | - | GH38 |
| TF | HRGMv2_4784_11 | HRGMv2_4784_11_13 | 17335 | 18204 | + | HTH_AraC |
| TC | HRGMv2_4784_11 | HRGMv2_4784_11_14 | 18285 | 21014 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_4784_11_12
Type: CAZyme
Location: 14164 - 17220 (-)
Type: CAZyme
Location: 14164 - 17220 (-)
Gene ID: HRGMv2_4784_11_13
Type: TF
Location: 17335 - 18204 (+)
Type: TF
Location: 17335 - 18204 (+)
Gene ID: HRGMv2_4784_11_14
Type: TC
Location: 18285 - 21014 (+)
Type: TC
Location: 18285 - 21014 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.