Cluster: HRGMv2_4784_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_02188
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4784_9 | HRGMv2_4784_9_36 | 38851 | 41178 | - | CBM85 | GH10 |
| NULL(UNKNOWN) | HRGMv2_4784_9 | HRGMv2_4784_9_37 | 42028 | 42606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4784_9 | HRGMv2_4784_9_38 | 42607 | 44463 | + | Transket_pyr | Transketolase_C | DXP_synthase_N |
| TC | HRGMv2_4784_9 | HRGMv2_4784_9_39 | 44456 | 45253 | + | 1.C.109.1.5 |
Gene ID: HRGMv2_4784_9_36
Type: CAZyme
Location: 38851 - 41178 (-)
Type: CAZyme
Location: 38851 - 41178 (-)
Gene ID: HRGMv2_4784_9_37
Type:
Location: 42028 - 42606 (+)
Type:
Location: 42028 - 42606 (+)
Gene ID: HRGMv2_4784_9_38
Type: pfam
Location: 42607 - 44463 (+)
Type: pfam
Location: 42607 - 44463 (+)
Gene ID: HRGMv2_4784_9_39
Type: TC
Location: 44456 - 45253 (+)
Type: TC
Location: 44456 - 45253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.