Cluster: HRGMv2_4784_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4784
- CGC Family ID: CGCFAM_00112
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_2 | 2610 | 4295 | + | 3.A.1.1.9 |
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_3 | 4411 | 5385 | + | 3.A.1.1.10 |
| TC | HRGMv2_4784_1 | HRGMv2_4784_1_4 | 5402 | 6304 | + | 3.A.1.1.29 |
| CAZyme | HRGMv2_4784_1 | HRGMv2_4784_1_5 | 6399 | 7835 | + | GH77 |
Gene ID: HRGMv2_4784_1_2
Type: TC
Location: 2610 - 4295 (+)
Type: TC
Location: 2610 - 4295 (+)
Gene ID: HRGMv2_4784_1_3
Type: TC
Location: 4411 - 5385 (+)
Type: TC
Location: 4411 - 5385 (+)
Gene ID: HRGMv2_4784_1_4
Type: TC
Location: 5402 - 6304 (+)
Type: TC
Location: 5402 - 6304 (+)
Gene ID: HRGMv2_4784_1_5
Type: CAZyme
Location: 6399 - 7835 (+)
Type: CAZyme
Location: 6399 - 7835 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
JAJXRJ01
Species
JAJXRJ01 sp021629085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.