Cluster: HRGMv2_4780_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4780
- CGC Family ID: CGCFAM_00514
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4780_30 | HRGMv2_4780_30_2 | 1985 | 3160 | - | GH130_13 |
| TF | HRGMv2_4780_30 | HRGMv2_4780_30_3 | 3226 | 5529 | - | HTH_AraC |
| TC | HRGMv2_4780_30 | HRGMv2_4780_30_4 | 5822 | 6778 | + | 3.A.1.1.10 |
| TC | HRGMv2_4780_30 | HRGMv2_4780_30_5 | 6780 | 7661 | + | 3.A.1.1.10 |
| TC | HRGMv2_4780_30 | HRGMv2_4780_30_6 | 7734 | 8966 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_4780_30_2
Type: CAZyme
Location: 1985 - 3160 (-)
Type: CAZyme
Location: 1985 - 3160 (-)
Gene ID: HRGMv2_4780_30_3
Type: TF
Location: 3226 - 5529 (-)
Type: TF
Location: 3226 - 5529 (-)
Gene ID: HRGMv2_4780_30_4
Type: TC
Location: 5822 - 6778 (+)
Type: TC
Location: 5822 - 6778 (+)
Gene ID: HRGMv2_4780_30_5
Type: TC
Location: 6780 - 7661 (+)
Type: TC
Location: 6780 - 7661 (+)
Gene ID: HRGMv2_4780_30_6
Type: TC
Location: 7734 - 8966 (+)
Type: TC
Location: 7734 - 8966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia sp022769845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.