Cluster: HRGMv2_4780_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4780
- CGC Family ID: CGCFAM_00248
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4780_19 | HRGMv2_4780_19_2 | 3323 | 4102 | - | GH10 |
| pfam | HRGMv2_4780_19 | HRGMv2_4780_19_3 | 4118 | 4591 | - | ThuA |
| NULL(UNKNOWN) | HRGMv2_4780_19 | HRGMv2_4780_19_4 | 5042 | 5266 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4780_19 | HRGMv2_4780_19_5 | 5509 | 6033 | - | 3.A.1.25.3 |
| pfam | HRGMv2_4780_19 | HRGMv2_4780_19_6 | 6276 | 6647 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | HRGMv2_4780_19 | HRGMv2_4780_19_7 | 6693 | 7307 | - | Ribosomal_L10 |
| TC | HRGMv2_4780_19 | HRGMv2_4780_19_8 | 7492 | 8184 | - | 1.C.82.1.1 |
Gene ID: HRGMv2_4780_19_2
Type: CAZyme
Location: 3323 - 4102 (-)
Type: CAZyme
Location: 3323 - 4102 (-)
Gene ID: HRGMv2_4780_19_3
Type: pfam
Location: 4118 - 4591 (-)
Type: pfam
Location: 4118 - 4591 (-)
Gene ID: HRGMv2_4780_19_4
Type:
Location: 5042 - 5266 (+)
Type:
Location: 5042 - 5266 (+)
Gene ID: HRGMv2_4780_19_5
Type: TC
Location: 5509 - 6033 (-)
Type: TC
Location: 5509 - 6033 (-)
Gene ID: HRGMv2_4780_19_6
Type: pfam
Location: 6276 - 6647 (-)
Type: pfam
Location: 6276 - 6647 (-)
Gene ID: HRGMv2_4780_19_7
Type: pfam
Location: 6693 - 7307 (-)
Type: pfam
Location: 6693 - 7307 (-)
Gene ID: HRGMv2_4780_19_8
Type: TC
Location: 7492 - 8184 (-)
Type: TC
Location: 7492 - 8184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia sp022769845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.