Cluster: HRGMv2_4780_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4780
- CGC Family ID: CGCFAM_09210
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4780_15 | HRGMv2_4780_15_2 | 2910 | 4454 | + | 3.A.1.1.10 |
| pfam | HRGMv2_4780_15 | HRGMv2_4780_15_3 | 4475 | 6796 | + | Big_5 | Big_5 |
| CAZyme | HRGMv2_4780_15 | HRGMv2_4780_15_4 | 6853 | 9507 | + | PL35 |
| CAZyme | HRGMv2_4780_15 | HRGMv2_4780_15_5 | 9532 | 11295 | + | GH36 |
Gene ID: HRGMv2_4780_15_2
Type: TC
Location: 2910 - 4454 (+)
Type: TC
Location: 2910 - 4454 (+)
Gene ID: HRGMv2_4780_15_3
Type: pfam
Location: 4475 - 6796 (+)
Type: pfam
Location: 4475 - 6796 (+)
Gene ID: HRGMv2_4780_15_4
Type: CAZyme
Location: 6853 - 9507 (+)
Type: CAZyme
Location: 6853 - 9507 (+)
Gene ID: HRGMv2_4780_15_5
Type: CAZyme
Location: 9532 - 11295 (+)
Type: CAZyme
Location: 9532 - 11295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia sp022769845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.