Cluster: HRGMv2_4780_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4780
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4780_7 | HRGMv2_4780_7_4 | 5202 | 6542 | + | 2.A.40.7.4 |
| STP | HRGMv2_4780_7 | HRGMv2_4780_7_5 | 6576 | 7133 | + | Pribosyltran |
| pfam | HRGMv2_4780_7 | HRGMv2_4780_7_6 | 7362 | 7718 | + | EamA |
| TC | HRGMv2_4780_7 | HRGMv2_4780_7_7 | 7860 | 8651 | + | 3.A.1.3.15 |
| CAZyme | HRGMv2_4780_7 | HRGMv2_4780_7_8 | 9050 | 11488 | - | GH2 |
Gene ID: HRGMv2_4780_7_4
Type: TC
Location: 5202 - 6542 (+)
Type: TC
Location: 5202 - 6542 (+)
Gene ID: HRGMv2_4780_7_5
Type: STP
Location: 6576 - 7133 (+)
Type: STP
Location: 6576 - 7133 (+)
Gene ID: HRGMv2_4780_7_6
Type: pfam
Location: 7362 - 7718 (+)
Type: pfam
Location: 7362 - 7718 (+)
Gene ID: HRGMv2_4780_7_7
Type: TC
Location: 7860 - 8651 (+)
Type: TC
Location: 7860 - 8651 (+)
Gene ID: HRGMv2_4780_7_8
Type: CAZyme
Location: 9050 - 11488 (-)
Type: CAZyme
Location: 9050 - 11488 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia sp022769845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.