Cluster: HRGMv2_4780_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4780
- CGC Family ID: CGCFAM_02622
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4780_95 | HRGMv2_4780_95_1 | 53 | 793 | - | CE1 |
| pfam | HRGMv2_4780_95 | HRGMv2_4780_95_2 | 945 | 1604 | + | SSB |
| pfam | HRGMv2_4780_95 | HRGMv2_4780_95_3 | 1711 | 4026 | - | SLH | SLH |
| TC | HRGMv2_4780_95 | HRGMv2_4780_95_4 | 4102 | 5286 | - | 3.A.1.122.2 |
| TC | HRGMv2_4780_95 | HRGMv2_4780_95_5 | 5283 | 6008 | - | 3.A.1.122.7 |
Gene ID: HRGMv2_4780_95_1
Type: CAZyme
Location: 53 - 793 (-)
Type: CAZyme
Location: 53 - 793 (-)
Gene ID: HRGMv2_4780_95_2
Type: pfam
Location: 945 - 1604 (+)
Type: pfam
Location: 945 - 1604 (+)
Gene ID: HRGMv2_4780_95_3
Type: pfam
Location: 1711 - 4026 (-)
Type: pfam
Location: 1711 - 4026 (-)
Gene ID: HRGMv2_4780_95_4
Type: TC
Location: 4102 - 5286 (-)
Type: TC
Location: 4102 - 5286 (-)
Gene ID: HRGMv2_4780_95_5
Type: TC
Location: 5283 - 6008 (-)
Type: TC
Location: 5283 - 6008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
Qingrenia
Species
Qingrenia sp022769845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.