Cluster: HRGMv2_4752_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4752
- CGC Family ID: CGCFAM_06229
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4752_2 | HRGMv2_4752_2_184 | 257181 | 258650 | - | GH13_5 |
| pfam | HRGMv2_4752_2 | HRGMv2_4752_2_185 | 258770 | 259045 | - | Ribosomal_S18 |
| TC | HRGMv2_4752_2 | HRGMv2_4752_2_186 | 259084 | 259509 | - | 3.A.7.19.1 |
| pfam | HRGMv2_4752_2 | HRGMv2_4752_2_187 | 259534 | 259818 | - | Ribosomal_S6 |
| TC | HRGMv2_4752_2 | HRGMv2_4752_2_188 | 260024 | 260902 | + | 2.A.119.2.2 |
Gene ID: HRGMv2_4752_2_184
Type: CAZyme
Location: 257181 - 258650 (-)
Type: CAZyme
Location: 257181 - 258650 (-)
Gene ID: HRGMv2_4752_2_185
Type: pfam
Location: 258770 - 259045 (-)
Type: pfam
Location: 258770 - 259045 (-)
Gene ID: HRGMv2_4752_2_186
Type: TC
Location: 259084 - 259509 (-)
Type: TC
Location: 259084 - 259509 (-)
Gene ID: HRGMv2_4752_2_187
Type: pfam
Location: 259534 - 259818 (-)
Type: pfam
Location: 259534 - 259818 (-)
Gene ID: HRGMv2_4752_2_188
Type: TC
Location: 260024 - 260902 (+)
Type: TC
Location: 260024 - 260902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.