Cluster: HRGMv2_4752_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4752
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4752_2 | HRGMv2_4752_2_57 | 65830 | 66528 | + | GT51 |
| pfam | HRGMv2_4752_2 | HRGMv2_4752_2_58 | 66589 | 68715 | - | Gly_radical | ATP-cone | NRDD |
| STP | HRGMv2_4752_2 | HRGMv2_4752_2_59 | 68865 | 69470 | + | TetR_N |
| TC | HRGMv2_4752_2 | HRGMv2_4752_2_60 | 69493 | 70581 | - | 1.A.23.4.2 |
| CAZyme | HRGMv2_4752_2 | HRGMv2_4752_2_61 | 70731 | 72596 | - | GH13_39 |
Gene ID: HRGMv2_4752_2_57
Type: CAZyme
Location: 65830 - 66528 (+)
Type: CAZyme
Location: 65830 - 66528 (+)
Gene ID: HRGMv2_4752_2_58
Type: pfam
Location: 66589 - 68715 (-)
Type: pfam
Location: 66589 - 68715 (-)
Gene ID: HRGMv2_4752_2_59
Type: STP
Location: 68865 - 69470 (+)
Type: STP
Location: 68865 - 69470 (+)
Gene ID: HRGMv2_4752_2_60
Type: TC
Location: 69493 - 70581 (-)
Type: TC
Location: 69493 - 70581 (-)
Gene ID: HRGMv2_4752_2_61
Type: CAZyme
Location: 70731 - 72596 (-)
Type: CAZyme
Location: 70731 - 72596 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.