Cluster: HRGMv2_4752_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4752
- CGC Family ID: CGCFAM_02833
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4752_1 | HRGMv2_4752_1_203 | 259720 | 262128 | + | 3.A.12.1.1 |
| NULL(UNKNOWN) | HRGMv2_4752_1 | HRGMv2_4752_1_204 | 262162 | 263718 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4752_1 | HRGMv2_4752_1_205 | 263728 | 265380 | + | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| CAZyme | HRGMv2_4752_1 | HRGMv2_4752_1_206 | 265405 | 267291 | + | GH15 |
| STP | HRGMv2_4752_1 | HRGMv2_4752_1_207 | 267296 | 268651 | + | AAA |
| pfam | HRGMv2_4752_1 | HRGMv2_4752_1_208 | 268682 | 269758 | + | DAC | DisA-linker |
| TC | HRGMv2_4752_1 | HRGMv2_4752_1_209 | 269811 | 270599 | + | 3.D.1.8.1 |
Gene ID: HRGMv2_4752_1_203
Type: TC
Location: 259720 - 262128 (+)
Type: TC
Location: 259720 - 262128 (+)
Gene ID: HRGMv2_4752_1_204
Type:
Location: 262162 - 263718 (+)
Type:
Location: 262162 - 263718 (+)
Gene ID: HRGMv2_4752_1_205
Type: pfam
Location: 263728 - 265380 (+)
Type: pfam
Location: 263728 - 265380 (+)
Gene ID: HRGMv2_4752_1_206
Type: CAZyme
Location: 265405 - 267291 (+)
Type: CAZyme
Location: 265405 - 267291 (+)
Gene ID: HRGMv2_4752_1_207
Type: STP
Location: 267296 - 268651 (+)
Type: STP
Location: 267296 - 268651 (+)
Gene ID: HRGMv2_4752_1_208
Type: pfam
Location: 268682 - 269758 (+)
Type: pfam
Location: 268682 - 269758 (+)
Gene ID: HRGMv2_4752_1_209
Type: TC
Location: 269811 - 270599 (+)
Type: TC
Location: 269811 - 270599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.