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Cluster: HRGMv2_4752_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4752_7 HRGMv2_4752_7_6 6198 7337 - 9.B.160.1.10
TC HRGMv2_4752_7 HRGMv2_4752_7_7 7388 9103 - 4.C.1.1.4
TC HRGMv2_4752_7 HRGMv2_4752_7_8 9250 10278 + 8.A.59.4.1
pfam HRGMv2_4752_7 HRGMv2_4752_7_9 10315 11277 + DUF975
pfam HRGMv2_4752_7 HRGMv2_4752_7_10 11322 13472 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC HRGMv2_4752_7 HRGMv2_4752_7_11 13488 15071 - 3.A.1.121.4
pfam HRGMv2_4752_7 HRGMv2_4752_7_12 15245 16456 + PGA_cap
TC HRGMv2_4752_7 HRGMv2_4752_7_13 16469 17416 - 1.A.35.3.1
pfam HRGMv2_4752_7 HRGMv2_4752_7_14 17688 19421 - VanW | G5 | PG_binding_4
TF HRGMv2_4752_7 HRGMv2_4752_7_15 19569 20144 + HTH_3
CAZyme HRGMv2_4752_7 HRGMv2_4752_7_16 20248 20715 + CBM25
Gene ID: HRGMv2_4752_7_6
Type: TC
Location: 6198 - 7337 (-)
Gene ID: HRGMv2_4752_7_7
Type: TC
Location: 7388 - 9103 (-)
Gene ID: HRGMv2_4752_7_8
Type: TC
Location: 9250 - 10278 (+)
Gene ID: HRGMv2_4752_7_9
Type: pfam
Location: 10315 - 11277 (+)
Gene ID: HRGMv2_4752_7_10
Type: pfam
Location: 11322 - 13472 (-)
Gene ID: HRGMv2_4752_7_11
Type: TC
Location: 13488 - 15071 (-)
Gene ID: HRGMv2_4752_7_12
Type: pfam
Location: 15245 - 16456 (+)
Gene ID: HRGMv2_4752_7_13
Type: TC
Location: 16469 - 17416 (-)
Gene ID: HRGMv2_4752_7_14
Type: pfam
Location: 17688 - 19421 (-)
Gene ID: HRGMv2_4752_7_15
Type: TF
Location: 19569 - 20144 (+)
Gene ID: HRGMv2_4752_7_16
Type: CAZyme
Location: 20248 - 20715 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
Merdicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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