Cluster: HRGMv2_4752_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4752
- CGC Family ID: CGCFAM_00660
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4752_4 | HRGMv2_4752_4_82 | 83566 | 84519 | + | GT2 |
| CAZyme | HRGMv2_4752_4 | HRGMv2_4752_4_83 | 84538 | 85554 | + | GT2 |
| pfam | HRGMv2_4752_4 | HRGMv2_4752_4_84 | 85608 | 86711 | + | GLF | NAD_binding_8 |
| pfam | HRGMv2_4752_4 | HRGMv2_4752_4_85 | 86743 | 87858 | + | PS_pyruv_trans |
| TC | HRGMv2_4752_4 | HRGMv2_4752_4_86 | 87879 | 89420 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_4752_4_82
Type: CAZyme
Location: 83566 - 84519 (+)
Type: CAZyme
Location: 83566 - 84519 (+)
Gene ID: HRGMv2_4752_4_83
Type: CAZyme
Location: 84538 - 85554 (+)
Type: CAZyme
Location: 84538 - 85554 (+)
Gene ID: HRGMv2_4752_4_84
Type: pfam
Location: 85608 - 86711 (+)
Type: pfam
Location: 85608 - 86711 (+)
Gene ID: HRGMv2_4752_4_85
Type: pfam
Location: 86743 - 87858 (+)
Type: pfam
Location: 86743 - 87858 (+)
Gene ID: HRGMv2_4752_4_86
Type: TC
Location: 87879 - 89420 (+)
Type: TC
Location: 87879 - 89420 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.