Cluster: HRGMv2_4750_CGC1
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_4750
- CGC Family ID: CGCFAM_01049
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_90 | 83271 | 85838 | - | GT35 |
| NULL(UNKNOWN) | HRGMv2_4750_1 | HRGMv2_4750_1_91 | 86065 | 86814 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4750_1 | HRGMv2_4750_1_92 | 86865 | 87200 | - | DUF2304 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_93 | 87267 | 87914 | - | GT2 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_94 | 87931 | 88878 | - | GT2 |
| pfam | HRGMv2_4750_1 | HRGMv2_4750_1_95 | 88871 | 90688 | - | DUF6020 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_96 | 90715 | 92739 | - | GT2 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_97 | 92750 | 94561 | - | GT32 |
| TC | HRGMv2_4750_1 | HRGMv2_4750_1_98 | 94577 | 95041 | - | 3.A.1.103.4 |
| TC | HRGMv2_4750_1 | HRGMv2_4750_1_99 | 95076 | 95351 | - | 3.A.1.103.4 |
| TC | HRGMv2_4750_1 | HRGMv2_4750_1_100 | 95368 | 96108 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_101 | 96164 | 98128 | - | GT2 | GT4 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_102 | 98150 | 99256 | - | GT4 |
| pfam | HRGMv2_4750_1 | HRGMv2_4750_1_103 | 99258 | 100679 | - | O-antigen_lig |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_104 | 100688 | 101638 | - | GT2 |
| CAZyme | HRGMv2_4750_1 | HRGMv2_4750_1_105 | 101650 | 102597 | - | GT2 |
Gene ID: HRGMv2_4750_1_90
Type: CAZyme
Location: 83271 - 85838 (-)
Type: CAZyme
Location: 83271 - 85838 (-)
Gene ID: HRGMv2_4750_1_91
Type:
Location: 86065 - 86814 (-)
Type:
Location: 86065 - 86814 (-)
Gene ID: HRGMv2_4750_1_92
Type: pfam
Location: 86865 - 87200 (-)
Type: pfam
Location: 86865 - 87200 (-)
Gene ID: HRGMv2_4750_1_93
Type: CAZyme
Location: 87267 - 87914 (-)
Type: CAZyme
Location: 87267 - 87914 (-)
Gene ID: HRGMv2_4750_1_94
Type: CAZyme
Location: 87931 - 88878 (-)
Type: CAZyme
Location: 87931 - 88878 (-)
Gene ID: HRGMv2_4750_1_95
Type: pfam
Location: 88871 - 90688 (-)
Type: pfam
Location: 88871 - 90688 (-)
Gene ID: HRGMv2_4750_1_96
Type: CAZyme
Location: 90715 - 92739 (-)
Type: CAZyme
Location: 90715 - 92739 (-)
Gene ID: HRGMv2_4750_1_97
Type: CAZyme
Location: 92750 - 94561 (-)
Type: CAZyme
Location: 92750 - 94561 (-)
Gene ID: HRGMv2_4750_1_98
Type: TC
Location: 94577 - 95041 (-)
Type: TC
Location: 94577 - 95041 (-)
Gene ID: HRGMv2_4750_1_99
Type: TC
Location: 95076 - 95351 (-)
Type: TC
Location: 95076 - 95351 (-)
Gene ID: HRGMv2_4750_1_100
Type: TC
Location: 95368 - 96108 (-)
Type: TC
Location: 95368 - 96108 (-)
Gene ID: HRGMv2_4750_1_101
Type: CAZyme
Location: 96164 - 98128 (-)
Type: CAZyme
Location: 96164 - 98128 (-)
Gene ID: HRGMv2_4750_1_102
Type: CAZyme
Location: 98150 - 99256 (-)
Type: CAZyme
Location: 98150 - 99256 (-)
Gene ID: HRGMv2_4750_1_103
Type: pfam
Location: 99258 - 100679 (-)
Type: pfam
Location: 99258 - 100679 (-)
Gene ID: HRGMv2_4750_1_104
Type: CAZyme
Location: 100688 - 101638 (-)
Type: CAZyme
Location: 100688 - 101638 (-)
Gene ID: HRGMv2_4750_1_105
Type: CAZyme
Location: 101650 - 102597 (-)
Type: CAZyme
Location: 101650 - 102597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1864
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.