Cluster: HRGMv2_4749_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4749
- CGC Family ID: CGCFAM_00999
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4749_28 | HRGMv2_4749_28_6 | 4714 | 5586 | - | 2.A.4.7.6 |
| NULL(UNKNOWN) | HRGMv2_4749_28 | HRGMv2_4749_28_7 | 5722 | 6063 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4749_28 | HRGMv2_4749_28_8 | 6100 | 6636 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4749_28 | HRGMv2_4749_28_9 | 6861 | 8126 | + | GT2 |
Gene ID: HRGMv2_4749_28_6
Type: TC
Location: 4714 - 5586 (-)
Type: TC
Location: 4714 - 5586 (-)
Gene ID: HRGMv2_4749_28_7
Type:
Location: 5722 - 6063 (+)
Type:
Location: 5722 - 6063 (+)
Gene ID: HRGMv2_4749_28_8
Type:
Location: 6100 - 6636 (-)
Type:
Location: 6100 - 6636 (-)
Gene ID: HRGMv2_4749_28_9
Type: CAZyme
Location: 6861 - 8126 (+)
Type: CAZyme
Location: 6861 - 8126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp930987745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4749_28_7 | vegan > omnivore | 1.05364 | 0.01301 |