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Cluster: HRGMv2_4749_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4749_20 HRGMv2_4749_20_6 5401 6837 - 2.A.66.2.16
pfam HRGMv2_4749_20 HRGMv2_4749_20_7 6834 7808 - DUF6625
NULL(UNKNOWN) HRGMv2_4749_20 HRGMv2_4749_20_8 7783 8919 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4749_20 HRGMv2_4749_20_9 8904 10058 - GT4
CAZyme HRGMv2_4749_20 HRGMv2_4749_20_10 10078 11187 - GT4
pfam HRGMv2_4749_20 HRGMv2_4749_20_11 11201 12376 - Radical_SAM | SPASM
CAZyme HRGMv2_4749_20 HRGMv2_4749_20_12 12379 13596 - GT4
TC HRGMv2_4749_20 HRGMv2_4749_20_13 13596 14306 - 9.B.18.1.2
Gene ID: HRGMv2_4749_20_6
Type: TC
Location: 5401 - 6837 (-)
Gene ID: HRGMv2_4749_20_7
Type: pfam
Location: 6834 - 7808 (-)
Gene ID: HRGMv2_4749_20_8
Type:
Location: 7783 - 8919 (-)
Gene ID: HRGMv2_4749_20_9
Type: CAZyme
Location: 8904 - 10058 (-)
Gene ID: HRGMv2_4749_20_10
Type: CAZyme
Location: 10078 - 11187 (-)
Gene ID: HRGMv2_4749_20_11
Type: pfam
Location: 11201 - 12376 (-)
Gene ID: HRGMv2_4749_20_12
Type: CAZyme
Location: 12379 - 13596 (-)
Gene ID: HRGMv2_4749_20_13
Type: TC
Location: 13596 - 14306 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp930987745

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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