Cluster: HRGMv2_4749_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4749
- CGC Family ID: CGCFAM_04090
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4749_8 | HRGMv2_4749_8_21 | 22842 | 24425 | - | 3.A.1.121.4 |
| pfam | HRGMv2_4749_8 | HRGMv2_4749_8_22 | 24595 | 24789 | - | DUF378 |
| pfam | HRGMv2_4749_8 | HRGMv2_4749_8_23 | 24915 | 26216 | + | Metallophos | PGA_cap |
| TC | HRGMv2_4749_8 | HRGMv2_4749_8_24 | 26312 | 27265 | - | 1.A.35.3.1 |
| NULL(UNKNOWN) | HRGMv2_4749_8 | HRGMv2_4749_8_25 | 27549 | 27803 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4749_8 | HRGMv2_4749_8_26 | 27904 | 29898 | - | VanW | G5 | PG_binding_4 |
| CAZyme | HRGMv2_4749_8 | HRGMv2_4749_8_27 | 30170 | 30646 | + | CBM25 |
Gene ID: HRGMv2_4749_8_21
Type: TC
Location: 22842 - 24425 (-)
Type: TC
Location: 22842 - 24425 (-)
Gene ID: HRGMv2_4749_8_22
Type: pfam
Location: 24595 - 24789 (-)
Type: pfam
Location: 24595 - 24789 (-)
Gene ID: HRGMv2_4749_8_23
Type: pfam
Location: 24915 - 26216 (+)
Type: pfam
Location: 24915 - 26216 (+)
Gene ID: HRGMv2_4749_8_24
Type: TC
Location: 26312 - 27265 (-)
Type: TC
Location: 26312 - 27265 (-)
Gene ID: HRGMv2_4749_8_25
Type:
Location: 27549 - 27803 (-)
Type:
Location: 27549 - 27803 (-)
Gene ID: HRGMv2_4749_8_26
Type: pfam
Location: 27904 - 29898 (-)
Type: pfam
Location: 27904 - 29898 (-)
Gene ID: HRGMv2_4749_8_27
Type: CAZyme
Location: 30170 - 30646 (+)
Type: CAZyme
Location: 30170 - 30646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp930987745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4749_8_27 | vegan > omnivore | 1.26606 | 0.01301 |