Cluster: HRGMv2_4749_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4749
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4749_3 | HRGMv2_4749_3_7 | 4736 | 5851 | - | GT28 |
| TC | HRGMv2_4749_3 | HRGMv2_4749_3_8 | 5927 | 6304 | - | 2.A.103.1.3 |
| TC | HRGMv2_4749_3 | HRGMv2_4749_3_9 | 6279 | 6437 | - | 2.A.103.1.3 |
| TC | HRGMv2_4749_3 | HRGMv2_4749_3_10 | 6406 | 7062 | - | 2.A.103.1.3 |
| TC | HRGMv2_4749_3 | HRGMv2_4749_3_11 | 7222 | 8064 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4749_3_7
Type: CAZyme
Location: 4736 - 5851 (-)
Type: CAZyme
Location: 4736 - 5851 (-)
Gene ID: HRGMv2_4749_3_8
Type: TC
Location: 5927 - 6304 (-)
Type: TC
Location: 5927 - 6304 (-)
Gene ID: HRGMv2_4749_3_9
Type: TC
Location: 6279 - 6437 (-)
Type: TC
Location: 6279 - 6437 (-)
Gene ID: HRGMv2_4749_3_10
Type: TC
Location: 6406 - 7062 (-)
Type: TC
Location: 6406 - 7062 (-)
Gene ID: HRGMv2_4749_3_11
Type: TC
Location: 7222 - 8064 (-)
Type: TC
Location: 7222 - 8064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp930987745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4749_3_10 | vegan > omnivore | 3.40285 | 0.01301 |