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Cluster: HRGMv2_4748_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4748_7 HRGMv2_4748_7_50 35088 35453 + 1.E.40.4.3
TC HRGMv2_4748_7 HRGMv2_4748_7_51 35545 37371 - 3.A.1.135.6
TC HRGMv2_4748_7 HRGMv2_4748_7_52 37372 39705 - 3.A.1.135.6
pfam HRGMv2_4748_7 HRGMv2_4748_7_53 39989 40849 + PseudoU_synth_2
TC HRGMv2_4748_7 HRGMv2_4748_7_54 41072 42871 - 3.A.16.1.1
pfam HRGMv2_4748_7 HRGMv2_4748_7_55 42953 43993 - DUF1189
pfam HRGMv2_4748_7 HRGMv2_4748_7_56 44010 45410 - tRNA-synt_1e | CysS_C
CAZyme HRGMv2_4748_7 HRGMv2_4748_7_57 45498 48134 - GT51
Gene ID: HRGMv2_4748_7_50
Type: TC
Location: 35088 - 35453 (+)
Gene ID: HRGMv2_4748_7_51
Type: TC
Location: 35545 - 37371 (-)
Gene ID: HRGMv2_4748_7_52
Type: TC
Location: 37372 - 39705 (-)
Gene ID: HRGMv2_4748_7_53
Type: pfam
Location: 39989 - 40849 (+)
Gene ID: HRGMv2_4748_7_54
Type: TC
Location: 41072 - 42871 (-)
Gene ID: HRGMv2_4748_7_55
Type: pfam
Location: 42953 - 43993 (-)
Gene ID: HRGMv2_4748_7_56
Type: pfam
Location: 44010 - 45410 (-)
Gene ID: HRGMv2_4748_7_57
Type: CAZyme
Location: 45498 - 48134 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-273
→
Species
CAG-273 sp019419955

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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