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Cluster: HRGMv2_4730_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_9 7988 8935 - GT2
TC HRGMv2_4730_12 HRGMv2_4730_12_10 8941 10056 - 9.B.146.1.1
NULL(UNKNOWN) HRGMv2_4730_12 HRGMv2_4730_12_11 10216 10578 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_12 10763 11713 - GT2
NULL(UNKNOWN) HRGMv2_4730_12 HRGMv2_4730_12_13 11715 11954 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4730_12 HRGMv2_4730_12_14 11998 13041 - DUF6020
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_15 13441 15639 - GT2 | GT4
NULL(UNKNOWN) HRGMv2_4730_12 HRGMv2_4730_12_16 15673 16056 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_17 16301 16975 - GT2
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_18 16991 18001 - GT4
NULL(UNKNOWN) HRGMv2_4730_12 HRGMv2_4730_12_19 18004 18228 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4730_12 HRGMv2_4730_12_20 18246 19019 - 3.A.1.103.4
TC HRGMv2_4730_12 HRGMv2_4730_12_21 19044 19781 - 3.A.1.103.4
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_22 20029 20934 - GT2
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_23 20935 22089 - GT4
pfam HRGMv2_4730_12 HRGMv2_4730_12_24 22233 23744 - O-antigen_lig
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_25 23757 24713 - GT2
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_26 24726 25679 - GT2
CAZyme HRGMv2_4730_12 HRGMv2_4730_12_27 25695 26789 - GT4
Gene ID: HRGMv2_4730_12_9
Type: CAZyme
Location: 7988 - 8935 (-)
Gene ID: HRGMv2_4730_12_10
Type: TC
Location: 8941 - 10056 (-)
Gene ID: HRGMv2_4730_12_11
Type:
Location: 10216 - 10578 (-)
Gene ID: HRGMv2_4730_12_12
Type: CAZyme
Location: 10763 - 11713 (-)
Gene ID: HRGMv2_4730_12_13
Type:
Location: 11715 - 11954 (-)
Gene ID: HRGMv2_4730_12_14
Type: pfam
Location: 11998 - 13041 (-)
Gene ID: HRGMv2_4730_12_15
Type: CAZyme
Location: 13441 - 15639 (-)
Gene ID: HRGMv2_4730_12_16
Type:
Location: 15673 - 16056 (-)
Gene ID: HRGMv2_4730_12_17
Type: CAZyme
Location: 16301 - 16975 (-)
Gene ID: HRGMv2_4730_12_18
Type: CAZyme
Location: 16991 - 18001 (-)
Gene ID: HRGMv2_4730_12_19
Type:
Location: 18004 - 18228 (-)
Gene ID: HRGMv2_4730_12_20
Type: TC
Location: 18246 - 19019 (-)
Gene ID: HRGMv2_4730_12_21
Type: TC
Location: 19044 - 19781 (-)
Gene ID: HRGMv2_4730_12_22
Type: CAZyme
Location: 20029 - 20934 (-)
Gene ID: HRGMv2_4730_12_23
Type: CAZyme
Location: 20935 - 22089 (-)
Gene ID: HRGMv2_4730_12_24
Type: pfam
Location: 22233 - 23744 (-)
Gene ID: HRGMv2_4730_12_25
Type: CAZyme
Location: 23757 - 24713 (-)
Gene ID: HRGMv2_4730_12_26
Type: CAZyme
Location: 24726 - 25679 (-)
Gene ID: HRGMv2_4730_12_27
Type: CAZyme
Location: 25695 - 26789 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-245
→
Species
CAG-245 sp944388645

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4730_12_12 vegan > omnivore 1.39769 0.02609

🧭 Explore Read Mapping of CGC

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