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Cluster: HRGMv2_4730_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4730_10 HRGMv2_4730_10_7 4887 5522 + 9.B.18.1.2
CAZyme HRGMv2_4730_10 HRGMv2_4730_10_8 5547 6305 + GT2
CAZyme HRGMv2_4730_10 HRGMv2_4730_10_9 6573 7238 + GT2
pfam HRGMv2_4730_10 HRGMv2_4730_10_10 7557 8354 + Glycos_transf_2
CAZyme HRGMv2_4730_10 HRGMv2_4730_10_11 8351 9628 + GT4
CAZyme HRGMv2_4730_10 HRGMv2_4730_10_12 9632 10534 + GT2
pfam HRGMv2_4730_10 HRGMv2_4730_10_13 10538 11644 + Wzy_C
TC HRGMv2_4730_10 HRGMv2_4730_10_14 11667 13217 + 2.A.66.1.40
Gene ID: HRGMv2_4730_10_7
Type: TC
Location: 4887 - 5522 (+)
Gene ID: HRGMv2_4730_10_8
Type: CAZyme
Location: 5547 - 6305 (+)
Gene ID: HRGMv2_4730_10_9
Type: CAZyme
Location: 6573 - 7238 (+)
Gene ID: HRGMv2_4730_10_10
Type: pfam
Location: 7557 - 8354 (+)
Gene ID: HRGMv2_4730_10_11
Type: CAZyme
Location: 8351 - 9628 (+)
Gene ID: HRGMv2_4730_10_12
Type: CAZyme
Location: 9632 - 10534 (+)
Gene ID: HRGMv2_4730_10_13
Type: pfam
Location: 10538 - 11644 (+)
Gene ID: HRGMv2_4730_10_14
Type: TC
Location: 11667 - 13217 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-245
→
Species
CAG-245 sp944388645

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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