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Cluster: HRGMv2_4730_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4730_7 HRGMv2_4730_7_28 32483 32956 - CBM25
pfam HRGMv2_4730_7 HRGMv2_4730_7_29 33132 34667 + VanW | G5 | PG_binding_4
TC HRGMv2_4730_7 HRGMv2_4730_7_30 35091 36035 + 1.A.35.3.4
NULL(UNKNOWN) HRGMv2_4730_7 HRGMv2_4730_7_31 37696 38112 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4730_7 HRGMv2_4730_7_32 38251 39831 + 3.A.1.121.4
pfam HRGMv2_4730_7 HRGMv2_4730_7_33 40026 40784 - DUF975
pfam HRGMv2_4730_7 HRGMv2_4730_7_34 40871 43051 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC HRGMv2_4730_7 HRGMv2_4730_7_35 43106 44053 - 8.A.59.4.2
Gene ID: HRGMv2_4730_7_28
Type: CAZyme
Location: 32483 - 32956 (-)
Gene ID: HRGMv2_4730_7_29
Type: pfam
Location: 33132 - 34667 (+)
Gene ID: HRGMv2_4730_7_30
Type: TC
Location: 35091 - 36035 (+)
Gene ID: HRGMv2_4730_7_31
Type:
Location: 37696 - 38112 (+)
Gene ID: HRGMv2_4730_7_32
Type: TC
Location: 38251 - 39831 (+)
Gene ID: HRGMv2_4730_7_33
Type: pfam
Location: 40026 - 40784 (-)
Gene ID: HRGMv2_4730_7_34
Type: pfam
Location: 40871 - 43051 (+)
Gene ID: HRGMv2_4730_7_35
Type: TC
Location: 43106 - 44053 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-245
→
Species
CAG-245 sp944388645

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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