Cluster: HRGMv2_4730_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4730
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4730_6 | HRGMv2_4730_6_31 | 29618 | 31111 | + | 2.A.1.15.17 |
| CAZyme | HRGMv2_4730_6 | HRGMv2_4730_6_32 | 31428 | 33998 | - | GT35 |
| CAZyme | HRGMv2_4730_6 | HRGMv2_4730_6_33 | 34480 | 35220 | + | GT51 |
| pfam | HRGMv2_4730_6 | HRGMv2_4730_6_34 | 35282 | 36454 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| STP | HRGMv2_4730_6 | HRGMv2_4730_6_35 | 36629 | 38380 | - | Fer4 |
| TC | HRGMv2_4730_6 | HRGMv2_4730_6_36 | 38404 | 40305 | - | 3.D.1.5.1 |
Gene ID: HRGMv2_4730_6_31
Type: TC
Location: 29618 - 31111 (+)
Type: TC
Location: 29618 - 31111 (+)
Gene ID: HRGMv2_4730_6_32
Type: CAZyme
Location: 31428 - 33998 (-)
Type: CAZyme
Location: 31428 - 33998 (-)
Gene ID: HRGMv2_4730_6_33
Type: CAZyme
Location: 34480 - 35220 (+)
Type: CAZyme
Location: 34480 - 35220 (+)
Gene ID: HRGMv2_4730_6_34
Type: pfam
Location: 35282 - 36454 (-)
Type: pfam
Location: 35282 - 36454 (-)
Gene ID: HRGMv2_4730_6_35
Type: STP
Location: 36629 - 38380 (-)
Type: STP
Location: 36629 - 38380 (-)
Gene ID: HRGMv2_4730_6_36
Type: TC
Location: 38404 - 40305 (-)
Type: TC
Location: 38404 - 40305 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp944388645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.