Cluster: HRGMv2_4730_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4730
- CGC Family ID: CGCFAM_02748
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4730_76 | HRGMv2_4730_76_1 | 3 | 1544 | + | 3.A.1.134.5 |
| NULL(UNKNOWN) | HRGMv2_4730_76 | HRGMv2_4730_76_2 | 1549 | 2040 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4730_76 | HRGMv2_4730_76_3 | 2053 | 2409 | + | DUF1093 |
| CAZyme | HRGMv2_4730_76 | HRGMv2_4730_76_4 | 2447 | 3145 | + | GT51 |
Gene ID: HRGMv2_4730_76_1
Type: TC
Location: 3 - 1544 (+)
Type: TC
Location: 3 - 1544 (+)
Gene ID: HRGMv2_4730_76_2
Type:
Location: 1549 - 2040 (+)
Type:
Location: 1549 - 2040 (+)
Gene ID: HRGMv2_4730_76_3
Type: pfam
Location: 2053 - 2409 (+)
Type: pfam
Location: 2053 - 2409 (+)
Gene ID: HRGMv2_4730_76_4
Type: CAZyme
Location: 2447 - 3145 (+)
Type: CAZyme
Location: 2447 - 3145 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-245
Species
CAG-245 sp944388645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4730_76_4 | vegan > omnivore | 1.14456 | 0.02609 |