Cluster: HRGMv2_4729_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4729
- CGC Family ID: CGCFAM_00497
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4729_5 | HRGMv2_4729_5_2 | 437 | 2368 | + | 9.A.8.1.5 |
| pfam | HRGMv2_4729_5 | HRGMv2_4729_5_3 | 2526 | 3917 | - | Polysacc_synt |
| NULL(UNKNOWN) | HRGMv2_4729_5 | HRGMv2_4729_5_4 | 4181 | 6064 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4729_5 | HRGMv2_4729_5_5 | 6154 | 7101 | - | GT2 |
Gene ID: HRGMv2_4729_5_2
Type: TC
Location: 437 - 2368 (+)
Type: TC
Location: 437 - 2368 (+)
Gene ID: HRGMv2_4729_5_3
Type: pfam
Location: 2526 - 3917 (-)
Type: pfam
Location: 2526 - 3917 (-)
Gene ID: HRGMv2_4729_5_4
Type:
Location: 4181 - 6064 (+)
Type:
Location: 4181 - 6064 (+)
Gene ID: HRGMv2_4729_5_5
Type: CAZyme
Location: 6154 - 7101 (-)
Type: CAZyme
Location: 6154 - 7101 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4729_5_5 | vegan > omnivore | 1.38218 | 0.02538 |