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Cluster: HRGMv2_4729_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4729_47 HRGMv2_4729_47_2 1197 3038 - 4.C.1.1.4
pfam HRGMv2_4729_47 HRGMv2_4729_47_3 3074 3634 - DUF308 | DUF308
CAZyme HRGMv2_4729_47 HRGMv2_4729_47_4 3746 5401 - GH5_2
pfam HRGMv2_4729_47 HRGMv2_4729_47_5 5417 6319 - ABC_trans_CmpB
NULL(UNKNOWN) HRGMv2_4729_47 HRGMv2_4729_47_6 6375 7238 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4729_47 HRGMv2_4729_47_7 7269 8357 - 2.A.86.1.9
pfam HRGMv2_4729_47 HRGMv2_4729_47_8 8344 9339 - Methyltransf_2 | Rsm22 | Methyltransf_25
NULL(UNKNOWN) HRGMv2_4729_47 HRGMv2_4729_47_9 9520 9813 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4729_47 HRGMv2_4729_47_10 9889 11451 - 3.A.18.1.1
Gene ID: HRGMv2_4729_47_2
Type: TC
Location: 1197 - 3038 (-)
Gene ID: HRGMv2_4729_47_3
Type: pfam
Location: 3074 - 3634 (-)
Gene ID: HRGMv2_4729_47_4
Type: CAZyme
Location: 3746 - 5401 (-)
Gene ID: HRGMv2_4729_47_5
Type: pfam
Location: 5417 - 6319 (-)
Gene ID: HRGMv2_4729_47_6
Type:
Location: 6375 - 7238 (-)
Gene ID: HRGMv2_4729_47_7
Type: TC
Location: 7269 - 8357 (-)
Gene ID: HRGMv2_4729_47_8
Type: pfam
Location: 8344 - 9339 (-)
Gene ID: HRGMv2_4729_47_9
Type:
Location: 9520 - 9813 (-)
Gene ID: HRGMv2_4729_47_10
Type: TC
Location: 9889 - 11451 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-492
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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