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Cluster: HRGMv2_4728_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4728_7 HRGMv2_4728_7_33 29071 32037 - 3.A.1.137.2
TC HRGMv2_4728_7 HRGMv2_4728_7_34 32065 32766 - 3.A.1.122.14
NULL(UNKNOWN) HRGMv2_4728_7 HRGMv2_4728_7_35 32898 33263 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4728_7 HRGMv2_4728_7_36 33423 41462 - GH94 | GT84
pfam HRGMv2_4728_7 HRGMv2_4728_7_37 41576 42031 + TsaE
NULL(UNKNOWN) HRGMv2_4728_7 HRGMv2_4728_7_38 42060 43175 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4728_7 HRGMv2_4728_7_39 43358 45076 - 4.C.1.1.4
Gene ID: HRGMv2_4728_7_33
Type: TC
Location: 29071 - 32037 (-)
Gene ID: HRGMv2_4728_7_34
Type: TC
Location: 32065 - 32766 (-)
Gene ID: HRGMv2_4728_7_35
Type:
Location: 32898 - 33263 (-)
Gene ID: HRGMv2_4728_7_36
Type: CAZyme
Location: 33423 - 41462 (-)
Gene ID: HRGMv2_4728_7_37
Type: pfam
Location: 41576 - 42031 (+)
Gene ID: HRGMv2_4728_7_38
Type:
Location: 42060 - 43175 (-)
Gene ID: HRGMv2_4728_7_39
Type: TC
Location: 43358 - 45076 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-269
→
Species
CAG-269 sp934129895

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4728_7_37 vegan > omnivore 1.77057 0.01810
HRGMv2_4728_7_39 vegan > omnivore 1.24927 0.01810

🧭 Explore Read Mapping of CGC

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