Cluster: HRGMv2_4728_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4728
- CGC Family ID: CGCFAM_08134
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4728_4 | HRGMv2_4728_4_47 | 42951 | 44018 | - | 1.A.23.4.1 |
| pfam | HRGMv2_4728_4 | HRGMv2_4728_4_48 | 44081 | 46564 | - | A_deaminase |
| NULL(UNKNOWN) | HRGMv2_4728_4 | HRGMv2_4728_4_49 | 46728 | 47207 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4728_4 | HRGMv2_4728_4_50 | 47295 | 48389 | - | GH3 |
Gene ID: HRGMv2_4728_4_47
Type: TC
Location: 42951 - 44018 (-)
Type: TC
Location: 42951 - 44018 (-)
Gene ID: HRGMv2_4728_4_48
Type: pfam
Location: 44081 - 46564 (-)
Type: pfam
Location: 44081 - 46564 (-)
Gene ID: HRGMv2_4728_4_49
Type:
Location: 46728 - 47207 (-)
Type:
Location: 46728 - 47207 (-)
Gene ID: HRGMv2_4728_4_50
Type: CAZyme
Location: 47295 - 48389 (-)
Type: CAZyme
Location: 47295 - 48389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934129895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.