Cluster: HRGMv2_4728_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4728
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4728_1 | HRGMv2_4728_1_165 | 150257 | 152152 | - | GH15 |
| pfam | HRGMv2_4728_1 | HRGMv2_4728_1_166 | 152182 | 153825 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| NULL(UNKNOWN) | HRGMv2_4728_1 | HRGMv2_4728_1_167 | 153851 | 155377 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4728_1 | HRGMv2_4728_1_168 | 155397 | 157889 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_4728_1_165
Type: CAZyme
Location: 150257 - 152152 (-)
Type: CAZyme
Location: 150257 - 152152 (-)
Gene ID: HRGMv2_4728_1_166
Type: pfam
Location: 152182 - 153825 (-)
Type: pfam
Location: 152182 - 153825 (-)
Gene ID: HRGMv2_4728_1_167
Type:
Location: 153851 - 155377 (-)
Type:
Location: 153851 - 155377 (-)
Gene ID: HRGMv2_4728_1_168
Type: TC
Location: 155397 - 157889 (-)
Type: TC
Location: 155397 - 157889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934129895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4728_1_168 | vegan > omnivore | 1.18271 | 0.01810 |