Cluster: HRGMv2_4728_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4728
- CGC Family ID: CGCFAM_10676
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4728_18 | HRGMv2_4728_18_6 | 4279 | 6822 | - | 3.A.3.2.4 |
| TC | HRGMv2_4728_18 | HRGMv2_4728_18_7 | 6877 | 7551 | - | 1.C.113.1.3 |
| CAZyme | HRGMv2_4728_18 | HRGMv2_4728_18_8 | 7637 | 8956 | - | GH77 |
Gene ID: HRGMv2_4728_18_6
Type: TC
Location: 4279 - 6822 (-)
Type: TC
Location: 4279 - 6822 (-)
Gene ID: HRGMv2_4728_18_7
Type: TC
Location: 6877 - 7551 (-)
Type: TC
Location: 6877 - 7551 (-)
Gene ID: HRGMv2_4728_18_8
Type: CAZyme
Location: 7637 - 8956 (-)
Type: CAZyme
Location: 7637 - 8956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934129895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4728_18_8 | vegan > omnivore | 1.01188 | 0.01810 |