Cluster: HRGMv2_4728_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4728
- CGC Family ID: CGCFAM_00637
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4728_1 | HRGMv2_4728_1_133 | 124569 | 124949 | + | 1.E.40.4.3 |
| CAZyme | HRGMv2_4728_1 | HRGMv2_4728_1_134 | 124978 | 125991 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_4728_1 | HRGMv2_4728_1_135 | 126133 | 126399 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4728_1 | HRGMv2_4728_1_136 | 126441 | 126728 | - | Ribosomal_S18 |
| TC | HRGMv2_4728_1 | HRGMv2_4728_1_137 | 126751 | 127173 | - | 3.A.7.19.1 |
Gene ID: HRGMv2_4728_1_133
Type: TC
Location: 124569 - 124949 (+)
Type: TC
Location: 124569 - 124949 (+)
Gene ID: HRGMv2_4728_1_134
Type: CAZyme
Location: 124978 - 125991 (-)
Type: CAZyme
Location: 124978 - 125991 (-)
Gene ID: HRGMv2_4728_1_135
Type:
Location: 126133 - 126399 (+)
Type:
Location: 126133 - 126399 (+)
Gene ID: HRGMv2_4728_1_136
Type: pfam
Location: 126441 - 126728 (-)
Type: pfam
Location: 126441 - 126728 (-)
Gene ID: HRGMv2_4728_1_137
Type: TC
Location: 126751 - 127173 (-)
Type: TC
Location: 126751 - 127173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934129895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4728_1_137 | vegan > omnivore | 1.15377 | 0.01810 |